Editable installs do not work correctly on Py3.12/3.13

Python 3.12 on windows:

haxquantpy looks for data in site-packages.

(py312) PS D:\Patrick\Documents\Projects\polariseval> python -m pip install -e .\haxquantpy\
Obtaining file:///D:/Patrick/Documents/Projects/polariseval/haxquantpy
  Installing build dependencies ... done
  Checking if build backend supports build_editable ... done
  Getting requirements to build editable ... done
  Installing backend dependencies ... done
  Preparing editable metadata (pyproject.toml) ... done
Requirement already satisfied: h5py in d:\miniforge3\envs\py312\lib\site-packages (from haxquantpy==0.0.2) (3.11.0)
Requirement already satisfied: matplotlib in d:\miniforge3\envs\py312\lib\site-packages (from haxquantpy==0.0.2) (3.9.1)
Requirement already satisfied: numpy in d:\miniforge3\envs\py312\lib\site-packages (from haxquantpy==0.0.2) (2.0.1)
Requirement already satisfied: scipy in d:\miniforge3\envs\py312\lib\site-packages (from haxquantpy==0.0.2) (1.14.0)
Requirement already satisfied: contourpy>=1.0.1 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (1.2.1)
Requirement already satisfied: cycler>=0.10 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (0.12.1)
Requirement already satisfied: fonttools>=4.22.0 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (4.53.1)
Requirement already satisfied: kiwisolver>=1.3.1 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (1.4.5)
Requirement already satisfied: packaging>=20.0 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (24.1)
Requirement already satisfied: pillow>=8 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (10.4.0)
Requirement already satisfied: pyparsing>=2.3.1 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (3.1.2)
Requirement already satisfied: python-dateutil>=2.7 in d:\miniforge3\envs\py312\lib\site-packages (from matplotlib->haxquantpy==0.0.2) (2.9.0)
Requirement already satisfied: six>=1.5 in d:\miniforge3\envs\py312\lib\site-packages (from python-dateutil>=2.7->matplotlib->haxquantpy==0.0.2) (1.16.0)
Building wheels for collected packages: haxquantpy
  Building editable for haxquantpy (pyproject.toml) ... done
  Created wheel for haxquantpy: filename=haxquantpy-0.0.2-py3-none-any.whl size=2869 sha256=95db2a4500cb0b53484c68e030aa07e1a9b7460fb6d3a43ad00ba724fbbb2433
  Stored in directory: C:\Users\Patrick\AppData\Local\Temp\pip-ephem-wheel-cache-bmydo8vk\wheels\63\99\69\ec107ece2057342996395c6ea45ea9e0f620e55cb02a2c30dc
Successfully built haxquantpy
Installing collected packages: haxquantpy
  Attempting uninstall: haxquantpy
    Found existing installation: haxquantpy 0.0.2
    Uninstalling haxquantpy-0.0.2:
      Successfully uninstalled haxquantpy-0.0.2
Successfully installed haxquantpy-0.0.2
(py312) PS D:\Patrick\Documents\Projects\polariseval> cd ..
(py312) PS D:\Patrick\Documents\Projects> python
Python 3.12.5 | packaged by conda-forge | (main, Aug  8 2024, 18:24:51) [MSC v.1940 64 bit (AMD64)] on win32
Type "help", "copyright", "credits" or "license" for more information.
>>> import haxquantpy
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "D:\miniforge3\envs\py312\Lib\site-packages\haxquantpy\__init__.py", line 1, in <module>
    from .photoionization import PhotoionizationParameterCoreLevel as PIC
  File "D:\miniforge3\envs\py312\Lib\site-packages\haxquantpy\photoionization.py", line 20, in <module>
    with open(atoms_filename, ) as atoms:
         ^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages\\haxquantpy\\files\\atoms.dat'

Similarly doing this with specqp you get a deprecation warning DEPRECATION: Legacy editable install of specqp==1.2.0 from file:///D:/Patrick/Documents/Projects/polariseval/specqp (setup.py develop) is deprecated. pip 25.0 will enforce this behaviour change. A possible replacement is to add a pyproject.toml or enable --use-pep517, and use setuptools >= 64. If the resulting installation is not behaving as expected, try using --config-settings editable_mode=compat. Please consult the setuptools documentation for more information. Discussion can be found at https://github.com/pypa/pip/issues/11457

So importing specqp works

(py312) PS D:\Patrick\Documents\Projects> python  
Python 3.12.5 | packaged by conda-forge | (main, Aug  8 2024, 18:24:51) [MSC v.1940 64 bit (AMD64)] on win32
Type "help", "copyright", "credits" or "license" for more information.
>>> import specqp

But even though the paths are set correctly on sys.path

>>> import sys
>>> sys.path
['', 'C:\\BornAgain-21.1\\python', 'D:\\miniforge3\\envs\\py312\\python312.zip', 'D:\\miniforge3\\envs\\py312\\DLLs', 'D:\\miniforge3\\envs\\py312\\Lib', 'D:\\miniforge3\\envs\\py312', 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages', 'D:\\Patrick\\Documents\\Projects\\polariseval\\haxquantpy', 'd:\\patrick\\documents\\projects\\polariseval', 'd:\\patrick\\documents\\projects\\polariseval\\specqp', 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages\\win32', 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages\\win32\\lib', 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages\\Pythonwin']

The import of haxquantpy still looks at the wrong location...

>>> import haxquantpy
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "D:\miniforge3\envs\py312\Lib\site-packages\haxquantpy\__init__.py", line 1, in <module>
    from .photoionization import PhotoionizationParameterCoreLevel as PIC
  File "D:\miniforge3\envs\py312\Lib\site-packages\haxquantpy\photoionization.py", line 20, in <module>
    with open(atoms_filename, ) as atoms:
         ^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [Errno 2] No such file or directory: 'D:\\miniforge3\\envs\\py312\\Lib\\site-packages\\haxquantpy\\files\\atoms.dat'

Might in this special case be related to how the package determines where its data is located.

I did test py3.11 - no real issues that i found there.

Python 3.13

Specqp does not get the deprecation warning anymore But, the local paths for haxquantpy and poleval are not being set!!

>>> import sys
>>> sys.path
['', 'C:\\BornAgain-21.1\\python', 'D:\\miniforge3\\envs\\py313\\python313.zip', 'D:\\miniforge3\\envs\\py313\\DLLs', 'D:\\miniforge3\\envs\\py313\\Lib', 'D:\\miniforge3\\envs\\py313', 'D:\\miniforge3\\envs\\py313\\Lib\\site-packages', 'D:\\Patrick\\Documents\\Projects\\polariseval\\haxquantpy', 'D:\\miniforge3\\envs\\py313\\Lib\\site-packages\\win32', 'D:\\miniforge3\\envs\\py313\\Lib\\site-packages\\win32\\lib', 'D:\\miniforge3\\envs\\py313\\Lib\\site-packages\\Pythonwin']

Rerunning python -m pip install -e .\polariseval\haxquantpy\ .\polariseval\

Changes nothing. Scanning the output for clues? Nope... building wheels, no warnings or other messages....

What the heck?